Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Gm45405-201ENSMUST00000211544 609 ntBASIC7.11□□□□□ -1.27
Lire1P11260 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm17821-201ENSMUST00000223448 1693 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm43180-201ENSMUST00000197541 2886 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Gm38331-201ENSMUST00000195719 2671 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.11□□□□□ -1.27
Lire1P11260 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Lire1P11260 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Lire1P11260 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Gm13750-201ENSMUST00000117621 465 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm14099-201ENSMUST00000117769 605 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm8624-201ENSMUST00000118083 432 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm15665-201ENSMUST00000119116 847 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.1□□□□□ -1.27
Lire1P11260 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.1□□□□□ -1.27
Lire1P11260 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Lire1P11260 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.1□□□□□ -1.27
Lire1P11260 Gm44623-201ENSMUST00000207934 434 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC7.1□□□□□ -1.27
Lire1P11260 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 AC165281.1-201ENSMUST00000225713 1011 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Lire1P11260 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Lire1P11260 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.1□□□□□ -1.27
Lire1P11260 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Lire1P11260 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.09□□□□□ -1.27
Lire1P11260 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Lire1P11260 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm12987-201ENSMUST00000118562 489 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm4773-201ENSMUST00000120392 702 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm14749-201ENSMUST00000121269 333 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm11882-201ENSMUST00000121463 506 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm23392-201ENSMUST00000157580 113 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms