Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm14893-201ENSMUST00000117904 282 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm16248-201ENSMUST00000124238 243 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm5456-201ENSMUST00000170706 844 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm17045-201ENSMUST00000178600 844 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm4556-201ENSMUST00000217808 355 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm7252-201ENSMUST00000223284 456 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 AC166574.7-201ENSMUST00000228502 704 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm25133-201ENSMUST00000082647 130 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Gm22865-201ENSMUST00000083949 214 ntBASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
Col4a6B1AVK5 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm24272-201ENSMUST00000102329 98 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm26067-201ENSMUST00000103789 110 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm11462-201ENSMUST00000117749 562 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm15765-201ENSMUST00000118407 910 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm5793-201ENSMUST00000119393 630 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm27998-201ENSMUST00000184902 361 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm21301-201ENSMUST00000189476 699 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm2602-201ENSMUST00000202112 571 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm37139-201ENSMUST00000192134 4419 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm45182-201ENSMUST00000207579 2404 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms