Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ube3bQ9ES34 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ube3bQ9ES34 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm16433-201ENSMUST00000062429 1984 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm11845-201ENSMUST00000117886 327 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm13252-201ENSMUST00000119355 321 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm15049-201ENSMUST00000120474 463 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm12459-201ENSMUST00000120659 356 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm12967-201ENSMUST00000122147 289 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm25713-201ENSMUST00000158625 109 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm16536-201ENSMUST00000162209 1589 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm2951-201ENSMUST00000169447 490 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm24576-201ENSMUST00000175508 248 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm5973-201ENSMUST00000178542 496 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm27864-201ENSMUST00000183704 190 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm29144-201ENSMUST00000189235 339 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm29238-201ENSMUST00000189709 695 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm28607-201ENSMUST00000190142 339 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm28121-201ENSMUST00000191420 339 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm18207-201ENSMUST00000205486 526 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm4898-201ENSMUST00000218519 832 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 CT030170.6-202ENSMUST00000223186 544 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 AC154747.4-202ENSMUST00000223826 852 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 AC118639.1-204ENSMUST00000226401 694 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 AC157212.1-201ENSMUST00000228398 1075 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm5316-201ENSMUST00000050391 270 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm16391-201ENSMUST00000086601 447 ntBASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ube3bQ9ES34 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm15854-201ENSMUST00000118879 808 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 n-R5s115-201ENSMUST00000179019 119 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm18033-201ENSMUST00000186678 550 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm18697-201ENSMUST00000191179 2126 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm42767-201ENSMUST00000198583 632 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm8035-201ENSMUST00000204625 687 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm44112-201ENSMUST00000204787 372 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm45299-201ENSMUST00000210199 420 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm18585-201ENSMUST00000215197 556 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 AC153561.1-201ENSMUST00000215943 469 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 n-R5s193-201ENSMUST00000082864 109 ntBASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ube3bQ9ES34 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms