Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm24869-201ENSMUST00000104072 128 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm5752-201ENSMUST00000117771 594 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm15739-201ENSMUST00000118049 872 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm11343-201ENSMUST00000120579 599 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm24011-201ENSMUST00000157732 268 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm6434-201ENSMUST00000163316 372 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm3611-201ENSMUST00000173687 877 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm21182-201ENSMUST00000178899 794 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm19035-202ENSMUST00000194575 959 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm18690-201ENSMUST00000204488 985 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Mir455-201ENSMUST00000093594 82 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm44553-201ENSMUST00000206316 2037 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm7571-201ENSMUST00000120252 927 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm22262-201ENSMUST00000158713 86 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm5611-201ENSMUST00000164523 852 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm27185-201ENSMUST00000184296 247 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Mir6403-201ENSMUST00000185007 129 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms