Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 BC085271-201ENSMUST00000191852 1487 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm15778-201ENSMUST00000118469 608 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm15481-201ENSMUST00000120264 539 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm13828-201ENSMUST00000122278 363 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm8046-201ENSMUST00000172151 616 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm18848-201ENSMUST00000182069 792 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm23011-202ENSMUST00000197855 275 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm6419-201ENSMUST00000097166 429 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.11□□□□□ -1.11
Smc1aQ9CU62 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm23323-201ENSMUST00000104471 133 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm5135-201ENSMUST00000121100 573 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm26179-201ENSMUST00000177723 132 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm27026-201ENSMUST00000183003 892 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Mir6987-201ENSMUST00000184789 73 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm7436-201ENSMUST00000187229 391 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm7369-201ENSMUST00000192738 936 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms