Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.07□□□□□ -1.28
Msh4Q99MT2 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.07□□□□□ -1.28
Msh4Q99MT2 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.07□□□□□ -1.28
Msh4Q99MT2 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.07□□□□□ -1.28
Msh4Q99MT2 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.07□□□□□ -1.28
Msh4Q99MT2 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.07□□□□□ -1.28
Msh4Q99MT2 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msh4Q99MT2 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm11928-201ENSMUST00000119323 437 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm28114-201ENSMUST00000187232 379 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm5418-201ENSMUST00000206932 528 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm32899-201ENSMUST00000219694 207 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Diaph3-204ENSMUST00000226254 682 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.06□□□□□ -1.28
Msh4Q99MT2 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msh4Q99MT2 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm25614-201ENSMUST00000104013 133 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm16221-201ENSMUST00000117331 393 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm11926-201ENSMUST00000118520 430 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm24139-201ENSMUST00000122780 288 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm2505-201ENSMUST00000200413 825 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm7394-201ENSMUST00000209138 1032 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm45432-201ENSMUST00000210391 416 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 CT025523.1-201ENSMUST00000228318 694 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms