Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm11320-201ENSMUST00000119434 463 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm11850-201ENSMUST00000119679 479 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm12754-201ENSMUST00000121908 454 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm15928-201ENSMUST00000122455 280 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm25178-201ENSMUST00000122633 325 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm25082-201ENSMUST00000177296 255 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm21182-201ENSMUST00000178899 794 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm5272-201ENSMUST00000182730 982 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm43590-201ENSMUST00000195987 387 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm4953-201ENSMUST00000077309 483 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm24613-201ENSMUST00000083266 130 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm45516-201ENSMUST00000211588 4182 ntBASIC8.07□□□□□ -1.12
Ccdc38Q8CDN8 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm22661-201ENSMUST00000104192 132 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm12075-201ENSMUST00000117426 397 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm5319-201ENSMUST00000118965 873 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm14787-201ENSMUST00000121236 388 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm22024-201ENSMUST00000122733 287 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm24738-201ENSMUST00000158856 123 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm17097-201ENSMUST00000166414 714 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm5920-201ENSMUST00000187390 853 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm28952-201ENSMUST00000189285 681 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm37322-201ENSMUST00000193409 337 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm43226-201ENSMUST00000202438 259 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm30196-201ENSMUST00000208957 160 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 AC160112.1-201ENSMUST00000219139 714 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms