Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm26016-201ENSMUST00000104403 129 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm6181-201ENSMUST00000117187 264 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm12321-201ENSMUST00000121485 804 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm23222-201ENSMUST00000158117 76 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Mir7115-201ENSMUST00000184275 64 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm28070-201ENSMUST00000191502 445 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm43926-201ENSMUST00000203978 430 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm18503-201ENSMUST00000220340 728 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.34□□□□□ -1.23
Trub1Q8C0D0 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.34□□□□□ -1.24
Trub1Q8C0D0 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm14893-201ENSMUST00000117904 282 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15739-201ENSMUST00000118049 872 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm12740-201ENSMUST00000118794 308 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm25277-201ENSMUST00000157266 324 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm7481-201ENSMUST00000182020 995 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Mir7084-201ENSMUST00000183876 70 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm3121-201ENSMUST00000187086 406 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm9723-201ENSMUST00000192100 457 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm6197-201ENSMUST00000192273 454 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm18752-201ENSMUST00000192876 608 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm20690-202ENSMUST00000195126 355 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm35638-201ENSMUST00000220724 652 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15109-201ENSMUST00000133085 2026 ntBASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms