Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.99□□□□□ -1.29
ClpbQ60649 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.99□□□□□ -1.29
ClpbQ60649 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ClpbQ60649 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
ClpbQ60649 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ClpbQ60649 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.99□□□□□ -1.29
ClpbQ60649 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.99□□□□□ -1.29
ClpbQ60649 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ClpbQ60649 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
ClpbQ60649 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.99□□□□□ -1.29
ClpbQ60649 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ClpbQ60649 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ClpbQ60649 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.99□□□□□ -1.29
ClpbQ60649 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ClpbQ60649 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ClpbQ60649 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
ClpbQ60649 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.99□□□□□ -1.29
ClpbQ60649 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
ClpbQ60649 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.98□□□□□ -1.29
ClpbQ60649 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.98□□□□□ -1.29
ClpbQ60649 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ClpbQ60649 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ClpbQ60649 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm15913-201ENSMUST00000118492 331 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm13626-201ENSMUST00000119435 402 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm16420-201ENSMUST00000120258 856 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm15362-201ENSMUST00000121459 388 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm8046-201ENSMUST00000172151 616 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.98□□□□□ -1.29
ClpbQ60649 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ClpbQ60649 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm5334-201ENSMUST00000187472 720 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm37225-201ENSMUST00000193423 325 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Gm44252-201ENSMUST00000204187 330 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm45782-201ENSMUST00000212670 366 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm4796-201ENSMUST00000219802 624 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ClpbQ60649 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ClpbQ60649 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ClpbQ60649 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.98□□□□□ -1.29
ClpbQ60649 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ClpbQ60649 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
ClpbQ60649 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC6.97□□□□□ -1.29
ClpbQ60649 Mir503-201ENSMUST00000102168 71 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Gm14248-201ENSMUST00000117790 544 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Gm11343-201ENSMUST00000120579 599 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Gm24139-201ENSMUST00000122780 288 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.97□□□□□ -1.29
ClpbQ60649 Gm11962-201ENSMUST00000145746 255 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.97□□□□□ -1.29
ClpbQ60649 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
ClpbQ60649 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.97□□□□□ -1.29
ClpbQ60649 Gm26413-201ENSMUST00000196783 126 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ClpbQ60649 Gm42464-202ENSMUST00000198111 774 ntBASIC6.97□□□□□ -1.29
ClpbQ60649 Gm20223-201ENSMUST00000199932 805 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms