Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm16284-201ENSMUST00000140995 400 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm17022-201ENSMUST00000166415 922 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Mir6241-201ENSMUST00000184225 103 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm7412-201ENSMUST00000191692 605 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm42883-201ENSMUST00000202594 222 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps54Q5SPW0 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm13423-201ENSMUST00000117205 888 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm12740-201ENSMUST00000118794 308 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm15842-201ENSMUST00000120513 618 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm26528-201ENSMUST00000181965 283 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm8182-201ENSMUST00000197863 769 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm2860-201ENSMUST00000199226 707 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm43725-201ENSMUST00000200122 369 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm19324-201ENSMUST00000213229 1169 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm5528-201ENSMUST00000076314 480 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Snora21-201ENSMUST00000082967 137 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps54Q5SPW0 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm26419-201ENSMUST00000104272 133 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm15081-201ENSMUST00000119794 844 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm22728-201ENSMUST00000158087 129 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm21182-201ENSMUST00000178899 794 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm27014-201ENSMUST00000182658 937 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Mir7058-201ENSMUST00000184637 75 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm18699-201ENSMUST00000190713 243 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm43212-201ENSMUST00000198208 394 ntBASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps54Q5SPW0 Gm18907-201ENSMUST00000209719 932 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms