Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nub1P54729 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nub1P54729 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nub1P54729 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Nub1P54729 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nub1P54729 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC8.39□□□□□ -1.07
Nub1P54729 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.39□□□□□ -1.07
Nub1P54729 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.39□□□□□ -1.07
Nub1P54729 Gm37303-201ENSMUST00000194202 1559 ntBASIC8.39□□□□□ -1.07
Nub1P54729 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nub1P54729 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nub1P54729 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nub1P54729 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.38□□□□□ -1.07
Nub1P54729 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm42852-201ENSMUST00000202649 1379 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.38□□□□□ -1.07
Nub1P54729 AC154552.6-201ENSMUST00000221365 1342 ntBASIC8.38□□□□□ -1.07
Nub1P54729 AC164297.4-201ENSMUST00000224225 1307 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm46199-201ENSMUST00000220373 1693 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm10651-201ENSMUST00000118212 609 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm14356-201ENSMUST00000118322 869 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm12692-201ENSMUST00000121092 546 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm15079-201ENSMUST00000121943 216 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm11358-201ENSMUST00000122310 373 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm22562-201ENSMUST00000157334 111 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm23663-201ENSMUST00000158045 80 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm16558-201ENSMUST00000163015 532 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm8046-201ENSMUST00000172151 616 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm19807-201ENSMUST00000173971 667 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm8974-201ENSMUST00000175770 479 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm26269-201ENSMUST00000180144 126 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.38□□□□□ -1.07
Nub1P54729 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.38□□□□□ -1.07
Nub1P54729 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm23604-202ENSMUST00000198428 137 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm43008-201ENSMUST00000202346 286 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm20074-201ENSMUST00000208144 484 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm45299-201ENSMUST00000210199 420 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm19174-201ENSMUST00000216944 956 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Gm6841-201ENSMUST00000220602 598 ntBASIC8.38□□□□□ -1.07
Nub1P54729 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.38□□□□□ -1.07
Nub1P54729 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Nub1P54729 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Nub1P54729 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Nub1P54729 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm10805-201ENSMUST00000099710 399 ntBASIC8.38□□□□□ -1.07
Nub1P54729 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.38□□□□□ -1.07
Nub1P54729 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nub1P54729 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.38□□□□□ -1.07
Nub1P54729 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Nub1P54729 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Nub1P54729 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Nub1P54729 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC8.37□□□□□ -1.07
Nub1P54729 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Nub1P54729 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.37□□□□□ -1.07
Nub1P54729 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Nub1P54729 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC8.37□□□□□ -1.07
Nub1P54729 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nub1P54729 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Nub1P54729 Gm12851-201ENSMUST00000117920 421 ntBASIC8.37□□□□□ -1.07
Nub1P54729 Gm6654-201ENSMUST00000118950 348 ntBASIC8.37□□□□□ -1.07
Nub1P54729 Gm13915-201ENSMUST00000119314 931 ntBASIC8.37□□□□□ -1.07
Nub1P54729 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.37□□□□□ -1.07
Nub1P54729 Gm8084-201ENSMUST00000120807 752 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms