Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm27030-201ENSMUST00000182551 464 ntBASIC8.05□□□□□ -1.12
Brca1P48754 Gm27295-201ENSMUST00000184264 153 ntBASIC8.05□□□□□ -1.12
Brca1P48754 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.05□□□□□ -1.12
Brca1P48754 Gm44902-201ENSMUST00000206177 805 ntBASIC8.05□□□□□ -1.12
Brca1P48754 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.05□□□□□ -1.12
Brca1P48754 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.05□□□□□ -1.12
Brca1P48754 Gm7499-201ENSMUST00000210423 813 ntBASIC8.05□□□□□ -1.12
Brca1P48754 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Brca1P48754 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Brca1P48754 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.05□□□□□ -1.12
Brca1P48754 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Brca1P48754 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Brca1P48754 Gm43864-201ENSMUST00000204452 4028 ntBASIC8.05□□□□□ -1.12
Brca1P48754 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Brca1P48754 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Brca1P48754 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Gm4992-201ENSMUST00000120256 768 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Gm6451-201ENSMUST00000121488 717 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Gm16027-201ENSMUST00000161618 758 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Gm4152-201ENSMUST00000172675 259 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Gm22655-201ENSMUST00000174949 96 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Brca1P48754 Gm9367-201ENSMUST00000205703 546 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Gm6575-201ENSMUST00000222946 697 ntBASIC8.04□□□□□ -1.12
Brca1P48754 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.04□□□□□ -1.12
Brca1P48754 AC107663.1-201ENSMUST00000224257 468 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.04□□□□□ -1.12
Brca1P48754 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Brca1P48754 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Brca1P48754 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.04□□□□□ -1.12
Brca1P48754 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC8.04□□□□□ -1.12
Brca1P48754 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brca1P48754 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Gm11271-201ENSMUST00000116054 440 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Gm2229-201ENSMUST00000193328 710 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.03□□□□□ -1.12
Brca1P48754 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Gm18040-201ENSMUST00000217922 827 ntBASIC8.03□□□□□ -1.12
Brca1P48754 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.03□□□□□ -1.12
Brca1P48754 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Brca1P48754 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Gm22126-201ENSMUST00000083244 142 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Mir425-201ENSMUST00000083645 85 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.03□□□□□ -1.12
Brca1P48754 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Brca1P48754 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brca1P48754 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Brca1P48754 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms