Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.15□□□□□ -1.26
Hoxc11P31313 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.15□□□□□ -1.26
Hoxc11P31313 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.15□□□□□ -1.26
Hoxc11P31313 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Hoxc11P31313 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Hoxc11P31313 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Hoxc11P31313 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Hoxc11P31313 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.15□□□□□ -1.26
Hoxc11P31313 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
Hoxc11P31313 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.15□□□□□ -1.27
Hoxc11P31313 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Hoxc11P31313 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Hoxc11P31313 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Hoxc11P31313 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Hoxc11P31313 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Hoxc11P31313 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Hoxc11P31313 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Hoxc11P31313 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm25396-201ENSMUST00000103981 133 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm13414-201ENSMUST00000117516 727 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm13739-201ENSMUST00000118020 530 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm16056-201ENSMUST00000119293 135 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm11945-201ENSMUST00000120551 476 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm24442-201ENSMUST00000157238 327 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm18848-201ENSMUST00000182069 792 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm27373-201ENSMUST00000184017 184 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm18558-201ENSMUST00000186253 1214 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 BC055308-201ENSMUST00000193380 2538 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.14□□□□□ -1.27
Hoxc11P31313 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm9110-201ENSMUST00000219035 617 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 AC126251.1-201ENSMUST00000228170 2707 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm26063-201ENSMUST00000083378 107 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm24411-201ENSMUST00000083428 131 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Gm25189-201ENSMUST00000083911 164 ntBASIC7.14□□□□□ -1.27
Hoxc11P31313 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxc11P31313 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Hoxc11P31313 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Hoxc11P31313 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxc11P31313 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxc11P31313 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.13□□□□□ -1.27
Hoxc11P31313 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxc11P31313 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Hoxc11P31313 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxc11P31313 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.13□□□□□ -1.27
Hoxc11P31313 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Hoxc11P31313 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms