Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
P20040 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.38□□□□□ -1.39
P20040 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.38□□□□□ -1.39
P20040 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.38□□□□□ -1.39
P20040 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.38□□□□□ -1.39
P20040 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.38□□□□□ -1.39
P20040 Gm15422-201ENSMUST00000117453 541 ntBASIC6.38□□□□□ -1.39
P20040 Gm15586-201ENSMUST00000121218 528 ntBASIC6.38□□□□□ -1.39
P20040 Gm15096-201ENSMUST00000121918 878 ntBASIC6.38□□□□□ -1.39
P20040 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 Gm22262-201ENSMUST00000158713 86 ntBASIC6.38□□□□□ -1.39
P20040 Gm17973-201ENSMUST00000174509 520 ntBASIC6.38□□□□□ -1.39
P20040 Gm27972-201ENSMUST00000184720 137 ntBASIC6.38□□□□□ -1.39
P20040 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.38□□□□□ -1.39
P20040 Gm28573-201ENSMUST00000187821 380 ntBASIC6.38□□□□□ -1.39
P20040 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.38□□□□□ -1.39
P20040 Gm28145-201ENSMUST00000189742 380 ntBASIC6.38□□□□□ -1.39
P20040 Gm28400-201ENSMUST00000191332 380 ntBASIC6.38□□□□□ -1.39
P20040 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.38□□□□□ -1.39
P20040 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.38□□□□□ -1.39
P20040 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.38□□□□□ -1.39
P20040 Gm5250-201ENSMUST00000059065 321 ntBASIC6.38□□□□□ -1.39
P20040 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Gm24613-201ENSMUST00000083266 130 ntBASIC6.38□□□□□ -1.39
P20040 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
P20040 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.38□□□□□ -1.39
P20040 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.38□□□□□ -1.39
P20040 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.38□□□□□ -1.39
P20040 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
P20040 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
P20040 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
P20040 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.38□□□□□ -1.39
P20040 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P20040 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
P20040 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.37□□□□□ -1.39
P20040 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
P20040 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
P20040 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
P20040 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.37□□□□□ -1.39
P20040 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.37□□□□□ -1.39
P20040 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.37□□□□□ -1.39
P20040 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
P20040 Gm24284-201ENSMUST00000104240 142 ntBASIC6.37□□□□□ -1.39
P20040 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
P20040 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.37□□□□□ -1.39
P20040 Gm13038-201ENSMUST00000119886 459 ntBASIC6.37□□□□□ -1.39
P20040 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.37□□□□□ -1.39
P20040 Mir5100-201ENSMUST00000174993 64 ntBASIC6.37□□□□□ -1.39
P20040 Gm24923-201ENSMUST00000178201 88 ntBASIC6.37□□□□□ -1.39
P20040 Mir6403-201ENSMUST00000185007 129 ntBASIC6.37□□□□□ -1.39
P20040 Gm27458-201ENSMUST00000185108 121 ntBASIC6.37□□□□□ -1.39
P20040 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Gm28894-201ENSMUST00000185214 615 ntBASIC6.37□□□□□ -1.39
P20040 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Gm37369-201ENSMUST00000194179 615 ntBASIC6.37□□□□□ -1.39
P20040 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.37□□□□□ -1.39
P20040 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.37□□□□□ -1.39
P20040 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.37□□□□□ -1.39
P20040 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.37□□□□□ -1.39
P20040 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.37□□□□□ -1.39
P20040 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.37□□□□□ -1.39
P20040 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.37□□□□□ -1.39
P20040 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.37□□□□□ -1.39
P20040 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
P20040 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
P20040 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.37□□□□□ -1.39
P20040 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
P20040 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms