Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Lire1P11260 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.12□□□□□ -1.27
Lire1P11260 AC131743.4-201ENSMUST00000221638 1553 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm23706-201ENSMUST00000104369 82 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm24472-201ENSMUST00000104484 132 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.12□□□□□ -1.27
Lire1P11260 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm13407-201ENSMUST00000118256 360 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm15192-201ENSMUST00000121005 293 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm12455-201ENSMUST00000121242 416 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm10182-201ENSMUST00000178676 273 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm18698-201ENSMUST00000192327 668 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm20690-202ENSMUST00000195126 355 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.12□□□□□ -1.27
Lire1P11260 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC7.12□□□□□ -1.27
Lire1P11260 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Desi2-202ENSMUST00000069568 1193 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Olfr192-201ENSMUST00000080251 925 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Gm44104-201ENSMUST00000204736 3777 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.12□□□□□ -1.27
Lire1P11260 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.12□□□□□ -1.27
Lire1P11260 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lire1P11260 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm5681-201ENSMUST00000189217 1533 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm25593-201ENSMUST00000102272 96 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm24284-201ENSMUST00000104240 142 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm15054-201ENSMUST00000117393 281 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm13358-201ENSMUST00000121427 569 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm24576-201ENSMUST00000175508 248 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm20797-201ENSMUST00000177894 383 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm15251-201ENSMUST00000177947 883 ntBASIC7.11□□□□□ -1.27
Lire1P11260 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Lire1P11260 Gm9274-201ENSMUST00000182505 984 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Calm5-201ENSMUST00000183198 589 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm28006-201ENSMUST00000183841 122 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.11□□□□□ -1.27
Lire1P11260 Gm38078-201ENSMUST00000192771 392 ntBASIC7.11□□□□□ -1.27
Lire1P11260 Gm2979-201ENSMUST00000193442 463 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms