Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm19035-202ENSMUST00000194575 959 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm9419-201ENSMUST00000200672 567 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm19764-201ENSMUST00000203630 649 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm44112-201ENSMUST00000204787 372 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm44931-201ENSMUST00000206056 545 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm2398-201ENSMUST00000218347 883 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm10123-201ENSMUST00000075723 490 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Mir455-201ENSMUST00000093594 82 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm14824-201ENSMUST00000119421 737 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm7651-201ENSMUST00000173398 901 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm22408-201ENSMUST00000174925 65 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm21839-201ENSMUST00000179536 378 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm27185-201ENSMUST00000184296 247 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm36961-201ENSMUST00000191980 132 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm43542-201ENSMUST00000199505 379 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm5250-201ENSMUST00000059065 321 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
Smc1aQ9CU62 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm25631-201ENSMUST00000104390 130 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm14248-201ENSMUST00000117790 544 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm6434-201ENSMUST00000163316 372 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Mir6409-201ENSMUST00000184957 92 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm28064-201ENSMUST00000185639 858 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm28164-201ENSMUST00000190143 442 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm6681-201ENSMUST00000205215 607 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm30646-201ENSMUST00000207662 180 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.12□□□□□ -1.11
Smc1aQ9CU62 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms