Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Use1Q9CQ56 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.79□□□□□ -1.32
Use1Q9CQ56 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm13006-201ENSMUST00000118683 214 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm15224-201ENSMUST00000120501 388 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm11295-201ENSMUST00000121379 803 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm12518-201ENSMUST00000122075 779 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm25947-201ENSMUST00000180343 110 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm37349-201ENSMUST00000194205 624 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm5791-201ENSMUST00000220840 489 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Use1Q9CQ56 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.78□□□□□ -1.32
Use1Q9CQ56 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Use1Q9CQ56 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
Use1Q9CQ56 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.32
Use1Q9CQ56 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Use1Q9CQ56 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Use1Q9CQ56 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Use1Q9CQ56 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Use1Q9CQ56 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm25167-201ENSMUST00000104188 120 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm11928-201ENSMUST00000119323 437 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 BC002163-201ENSMUST00000121906 319 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm22670-201ENSMUST00000158724 143 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Mir199b-201ENSMUST00000175066 110 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm29355-201ENSMUST00000188178 697 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm28416-201ENSMUST00000188334 292 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm28953-201ENSMUST00000188336 697 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm7200-201ENSMUST00000188426 1163 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm20788-201ENSMUST00000190538 697 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Trbv9-201ENSMUST00000194494 290 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm37395-201ENSMUST00000194721 697 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.77□□□□□ -1.33
Use1Q9CQ56 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms