Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clrn1Q8K445 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.05□□□□□ -1.28
Clrn1Q8K445 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clrn1Q8K445 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Clrn1Q8K445 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clrn1Q8K445 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.05□□□□□ -1.28
Clrn1Q8K445 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Clrn1Q8K445 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clrn1Q8K445 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.05□□□□□ -1.28
Clrn1Q8K445 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm43686-201ENSMUST00000197351 2439 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm16221-201ENSMUST00000117331 393 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm12593-201ENSMUST00000120981 743 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm14156-201ENSMUST00000121538 483 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm15843-201ENSMUST00000146593 529 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm25164-201ENSMUST00000158908 116 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm20702-201ENSMUST00000176181 460 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm19086-201ENSMUST00000190772 665 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm42965-201ENSMUST00000201254 250 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm18995-201ENSMUST00000202981 520 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC159622.1-201ENSMUST00000221004 554 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 CT009515.4-201ENSMUST00000228165 1494 ntBASIC7.04□□□□□ -1.28
Clrn1Q8K445 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clrn1Q8K445 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Clrn1Q8K445 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm25414-201ENSMUST00000101814 107 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Mir290a-201ENSMUST00000104627 83 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm12656-201ENSMUST00000118149 577 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm14836-201ENSMUST00000118567 471 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm13341-201ENSMUST00000120780 672 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm14369-201ENSMUST00000121355 285 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm14053-201ENSMUST00000121662 470 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm10086-201ENSMUST00000136334 354 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Mir3072-201ENSMUST00000175610 83 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 Gm27542-201ENSMUST00000184184 256 ntBASIC7.03□□□□□ -1.28
Clrn1Q8K445 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms