Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm22275-201ENSMUST00000122470 310 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm23639-201ENSMUST00000175078 132 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm7426-201ENSMUST00000179046 404 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Mir7011-201ENSMUST00000183768 73 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm27596-201ENSMUST00000185061 83 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm28070-201ENSMUST00000191502 445 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm26413-201ENSMUST00000196783 126 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm20223-201ENSMUST00000199932 805 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm43725-201ENSMUST00000200122 369 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm45072-201ENSMUST00000208673 929 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm34424-201ENSMUST00000213400 782 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Olfr683-201ENSMUST00000061284 960 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm9519-201ENSMUST00000206108 1337 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm649-201ENSMUST00000117284 1054 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm13878-201ENSMUST00000117986 577 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm15188-201ENSMUST00000121264 704 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm11257-201ENSMUST00000121313 315 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm10157-201ENSMUST00000139408 343 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm24239-201ENSMUST00000157791 255 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Mir5100-201ENSMUST00000174993 64 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Mir6972-201ENSMUST00000184774 64 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Brf1Q8CFK2 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.65□□□□□ -1.02
Brf1Q8CFK2 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.65□□□□□ -1.03
Brf1Q8CFK2 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Brf1Q8CFK2 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Brf1Q8CFK2 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.65□□□□□ -1.03
Brf1Q8CFK2 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Brf1Q8CFK2 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Brf1Q8CFK2 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms