Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm17205-201ENSMUST00000168370 1207 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm38373-201ENSMUST00000192042 288 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 AC164550.1-201ENSMUST00000217821 1066 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 AC122539.1-201ENSMUST00000219925 329 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm46424-201ENSMUST00000221567 168 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 AC125019.1-201ENSMUST00000224809 908 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Mir455-201ENSMUST00000093594 82 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 AC135119.1-202ENSMUST00000228435 2203 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm45793-201ENSMUST00000207900 1342 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 AC107452.3-201ENSMUST00000228807 1308 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm44121-201ENSMUST00000205169 2006 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 AC111010.1-203ENSMUST00000227287 1548 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm44898-201ENSMUST00000205934 2223 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm26416-201ENSMUST00000104280 134 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm23527-201ENSMUST00000104570 130 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm12635-201ENSMUST00000117285 752 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm12879-201ENSMUST00000120003 1182 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm12754-201ENSMUST00000121908 454 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm7651-201ENSMUST00000173398 901 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm21182-201ENSMUST00000178899 794 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm37328-201ENSMUST00000193191 640 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm19092-201ENSMUST00000209036 969 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 AC138604.2-201ENSMUST00000226620 921 ntBASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc60Q8C4J0 Gm10307-201ENSMUST00000189839 1337 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 AC125409.2-201ENSMUST00000221888 2158 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm45221-201ENSMUST00000207822 2272 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm6743-201ENSMUST00000117345 1066 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm12740-201ENSMUST00000118794 308 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm8421-201ENSMUST00000119439 305 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm18699-201ENSMUST00000190713 243 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm37349-201ENSMUST00000194205 624 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm8924-201ENSMUST00000197405 1132 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm21040-201ENSMUST00000199493 1132 ntBASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc60Q8C4J0 CT009711.4-201ENSMUST00000225685 198 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms