Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm12072-201ENSMUST00000118293 715 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm8644-201ENSMUST00000118619 596 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm12459-201ENSMUST00000120659 356 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm12477-201ENSMUST00000121221 571 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm22342-201ENSMUST00000122647 298 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm25505-201ENSMUST00000157220 246 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm7502-201ENSMUST00000169235 733 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm18501-201ENSMUST00000185363 664 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm44258-201ENSMUST00000204925 301 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm44931-201ENSMUST00000206056 545 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Gm43750-201ENSMUST00000199027 2493 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.36□□□□□ -1.23
Trub1Q8C0D0 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trub1Q8C0D0 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Mir503-201ENSMUST00000102168 71 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm14279-201ENSMUST00000117142 332 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm10243-201ENSMUST00000117571 333 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm14727-201ENSMUST00000118526 525 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm15188-201ENSMUST00000121264 704 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm14721-201ENSMUST00000121381 525 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm24057-201ENSMUST00000158616 302 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm17047-201ENSMUST00000167709 430 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm28428-201ENSMUST00000188886 697 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm28413-201ENSMUST00000189369 291 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm44971-201ENSMUST00000206192 337 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Diaph3-204ENSMUST00000226254 682 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Gm10247-201ENSMUST00000090395 333 ntBASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Trub1Q8C0D0 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 212.3 ms