Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm14048-201ENSMUST00000121864 1268 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm25437-201ENSMUST00000158282 132 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm5920-201ENSMUST00000187390 853 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm37392-201ENSMUST00000192098 516 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm6123-201ENSMUST00000193658 1069 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm18131-201ENSMUST00000199241 449 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 AC160112.1-201ENSMUST00000219139 714 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc40Q8BI79 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm22661-201ENSMUST00000104192 132 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm23323-201ENSMUST00000104471 133 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm5752-201ENSMUST00000117771 594 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm11987-201ENSMUST00000118524 381 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm15049-201ENSMUST00000120474 463 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm11945-201ENSMUST00000120551 476 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm11343-201ENSMUST00000120579 599 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm14053-201ENSMUST00000121662 470 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm24011-201ENSMUST00000157732 268 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm17097-201ENSMUST00000166414 714 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm43013-201ENSMUST00000198216 247 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms