Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm12424-201ENSMUST00000179673 447 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm27403-201ENSMUST00000184662 214 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm6750-201ENSMUST00000189273 268 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm37669-201ENSMUST00000192184 820 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm42861-201ENSMUST00000199596 634 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm19039-201ENSMUST00000204363 575 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm18469-201ENSMUST00000208850 439 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm18972-201ENSMUST00000218873 630 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm4928-201ENSMUST00000219622 850 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm18504-201ENSMUST00000220917 929 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm46317-201ENSMUST00000221103 393 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 AC123062.1-201ENSMUST00000221287 481 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 AC131117.2-203ENSMUST00000225886 950 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm10015-201ENSMUST00000072570 465 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm24035-201ENSMUST00000082867 107 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm6819-201ENSMUST00000185325 1891 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm18594-201ENSMUST00000175733 1403 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm13676-201ENSMUST00000122185 591 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm26048-201ENSMUST00000157305 142 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm25372-201ENSMUST00000158161 255 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm24347-201ENSMUST00000158711 142 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm17149-201ENSMUST00000164712 375 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm27861-201ENSMUST00000183920 214 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm18699-201ENSMUST00000190713 243 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm42509-201ENSMUST00000197390 781 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm43805-201ENSMUST00000198488 824 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm35412-201ENSMUST00000220437 999 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 AC192616.3-201ENSMUST00000220797 1124 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 AC144733.1-201ENSMUST00000222893 1289 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 AC147639.1-201ENSMUST00000224216 661 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 AC164295.2-201ENSMUST00000228539 757 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 CT009550.3-201ENSMUST00000228542 455 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm25259-201ENSMUST00000083048 193 ntBASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scaf4Q6PFF0 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms