Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.44□□□□□ -1.38
H3f3aP84244 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
H3f3aP84244 Gm22035-201ENSMUST00000157284 228 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm7891-201ENSMUST00000190284 843 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.44□□□□□ -1.38
H3f3aP84244 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.44□□□□□ -1.38
H3f3aP84244 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.44□□□□□ -1.38
H3f3aP84244 Gm43108-201ENSMUST00000200525 293 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm44380-201ENSMUST00000203125 293 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm4605-201ENSMUST00000203148 625 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm5154-201ENSMUST00000203971 399 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm43905-201ENSMUST00000204516 204 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.44□□□□□ -1.38
H3f3aP84244 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3f3aP84244 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
H3f3aP84244 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
H3f3aP84244 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3f3aP84244 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3f3aP84244 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
H3f3aP84244 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3f3aP84244 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
H3f3aP84244 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.44□□□□□ -1.38
H3f3aP84244 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
H3f3aP84244 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
H3f3aP84244 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3f3aP84244 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3f3aP84244 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.44□□□□□ -1.38
H3f3aP84244 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
H3f3aP84244 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm14279-201ENSMUST00000117142 332 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm10243-201ENSMUST00000117571 333 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm14201-201ENSMUST00000117627 289 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm13463-201ENSMUST00000119020 233 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm12944-201ENSMUST00000119262 463 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm22024-201ENSMUST00000122733 287 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.43□□□□□ -1.38
H3f3aP84244 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.43□□□□□ -1.38
H3f3aP84244 Mir5100-201ENSMUST00000174993 64 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm4308-201ENSMUST00000179735 914 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm29354-201ENSMUST00000187613 696 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm36928-201ENSMUST00000192466 694 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm8101-201ENSMUST00000192796 478 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm37325-201ENSMUST00000194971 694 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm44979-201ENSMUST00000206218 287 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm18960-201ENSMUST00000222962 713 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm24924-201ENSMUST00000084007 164 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm10247-201ENSMUST00000090395 333 ntBASIC6.43□□□□□ -1.38
H3f3aP84244 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
H3f3aP84244 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
H3f3aP84244 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.43□□□□□ -1.38
H3f3aP84244 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3f3aP84244 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms