Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm17170-201ENSMUST00000112785 316 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Gm25509-201ENSMUST00000116985 106 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm3760-201ENSMUST00000167475 804 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm7651-201ENSMUST00000173398 901 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm18848-201ENSMUST00000182069 792 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Mir8094-201ENSMUST00000183361 117 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Gm18960-201ENSMUST00000222962 713 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 AC154252.1-201ENSMUST00000226041 473 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Shmt1P50431 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
Shmt1P50431 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Shmt1P50431 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Gm37373-201ENSMUST00000194005 2812 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.74□□□□□ -1.17
Shmt1P50431 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Gm25757-201ENSMUST00000103986 123 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Gm24869-201ENSMUST00000104072 128 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm2709-201ENSMUST00000142979 350 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm17711-201ENSMUST00000172028 237 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Shmt1P50431 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Mir7084-201ENSMUST00000183876 70 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Gm9419-201ENSMUST00000200672 567 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm43905-201ENSMUST00000204516 204 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm45701-201ENSMUST00000212049 235 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm25189-201ENSMUST00000083911 164 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Shmt1P50431 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.73□□□□□ -1.17
Shmt1P50431 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Shmt1P50431 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms