Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm37247-201ENSMUST00000192549 730 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm43235-201ENSMUST00000200121 297 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm17875-201ENSMUST00000216005 941 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC9.05□□□□□ -0.96
Rfx1P48377 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 AC168056.3-201ENSMUST00000225395 2540 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Rfx1P48377 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm27013-202ENSMUST00000205067 1436 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC9.05□□□□□ -0.96
Rfx1P48377 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm44550-201ENSMUST00000207311 2058 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
Rfx1P48377 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rfx1P48377 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rfx1P48377 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Gm12883-201ENSMUST00000117867 364 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Gm26048-201ENSMUST00000157305 142 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Scarna17-201ENSMUST00000158064 79 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm17061-201ENSMUST00000163167 499 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Gm2966-201ENSMUST00000166052 481 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm17204-201ENSMUST00000167936 478 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC9.04□□□□□ -0.96
Rfx1P48377 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Trbv28-201ENSMUST00000192804 264 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm5309-201ENSMUST00000197416 677 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm43247-201ENSMUST00000198638 481 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm27680-202ENSMUST00000199221 807 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rfx1P48377 Gm45299-201ENSMUST00000210199 420 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm6989-201ENSMUST00000218409 654 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm272-201ENSMUST00000222073 919 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rfx1P48377 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rfx1P48377 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rfx1P48377 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm44562-201ENSMUST00000207194 1347 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Gm45793-201ENSMUST00000207900 1342 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 AC112680.1-201ENSMUST00000215435 1349 ntBASIC9.04□□□□□ -0.96
Rfx1P48377 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Rfx1P48377 Gm42898-201ENSMUST00000200370 3073 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms