Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
HttP42859 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.33□□□□□ -1.24
HttP42859 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
HttP42859 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
HttP42859 Gm19840-201ENSMUST00000169624 882 ntBASIC7.33□□□□□ -1.24
HttP42859 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
HttP42859 Gm43383-201ENSMUST00000195981 469 ntBASIC7.33□□□□□ -1.24
HttP42859 AC161884.2-201ENSMUST00000224513 227 ntBASIC7.33□□□□□ -1.24
HttP42859 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
HttP42859 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.33□□□□□ -1.24
HttP42859 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.33□□□□□ -1.24
HttP42859 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC7.32□□□□□ -1.24
HttP42859 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Gm8812-201ENSMUST00000118496 412 ntBASIC7.32□□□□□ -1.24
HttP42859 Gm13455-201ENSMUST00000118767 517 ntBASIC7.32□□□□□ -1.24
HttP42859 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.32□□□□□ -1.24
HttP42859 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
HttP42859 Gm34424-201ENSMUST00000213400 782 ntBASIC7.32□□□□□ -1.24
HttP42859 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.32□□□□□ -1.24
HttP42859 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HttP42859 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HttP42859 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HttP42859 Gm12650-201ENSMUST00000121966 258 ntBASIC7.32□□□□□ -1.24
HttP42859 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Gm20615-201ENSMUST00000177503 705 ntBASIC7.32□□□□□ -1.24
HttP42859 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.32□□□□□ -1.24
HttP42859 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.32□□□□□ -1.24
HttP42859 Gm7802-201ENSMUST00000216464 262 ntBASIC7.32□□□□□ -1.24
HttP42859 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC7.32□□□□□ -1.24
HttP42859 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HttP42859 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HttP42859 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HttP42859 Gm37150-201ENSMUST00000193900 2754 ntBASIC7.32□□□□□ -1.24
HttP42859 Gm35172-201ENSMUST00000196037 2649 ntBASIC7.32□□□□□ -1.24
HttP42859 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HttP42859 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.32□□□□□ -1.24
HttP42859 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.32□□□□□ -1.24
HttP42859 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC7.32□□□□□ -1.24
HttP42859 AC165092.4-201ENSMUST00000225025 679 ntBASIC7.32□□□□□ -1.24
HttP42859 AC170810.1-201ENSMUST00000228267 672 ntBASIC7.32□□□□□ -1.24
HttP42859 Gm7435-202ENSMUST00000216003 2424 ntBASIC7.31□□□□□ -1.24
HttP42859 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
HttP42859 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
HttP42859 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.31□□□□□ -1.24
HttP42859 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
HttP42859 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.31□□□□□ -1.24
HttP42859 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.31□□□□□ -1.24
HttP42859 Gm13533-201ENSMUST00000121104 177 ntBASIC7.31□□□□□ -1.24
HttP42859 Mir7006-201ENSMUST00000183624 69 ntBASIC7.31□□□□□ -1.24
HttP42859 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.31□□□□□ -1.24
HttP42859 Gm37295-201ENSMUST00000192186 109 ntBASIC7.31□□□□□ -1.24
HttP42859 Gm5110-201ENSMUST00000203122 1063 ntBASIC7.31□□□□□ -1.24
HttP42859 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
HttP42859 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HttP42859 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.31□□□□□ -1.24
HttP42859 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gm38352-201ENSMUST00000194459 2557 ntBASIC7.31□□□□□ -1.24
HttP42859 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms