Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm18508-201ENSMUST00000215790 1642 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 C78859-201ENSMUST00000212800 5943 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm37978-201ENSMUST00000194736 2915 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm15194-201ENSMUST00000120453 434 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm13000-201ENSMUST00000120937 496 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Defa-ps14-201ENSMUST00000121373 418 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 BC002163-201ENSMUST00000121906 319 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm13649-201ENSMUST00000122325 606 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Mir1968-201ENSMUST00000157429 68 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm26487-201ENSMUST00000158022 94 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm2959-201ENSMUST00000169844 621 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm8046-201ENSMUST00000172151 616 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm19480-201ENSMUST00000185547 667 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Mrgprb13-201ENSMUST00000188191 985 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Ighv1-38-201ENSMUST00000192755 349 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm43846-201ENSMUST00000200502 932 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 AC165349.2-201ENSMUST00000219097 426 ntBASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ube3bQ9ES34 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm16487-201ENSMUST00000105048 4037 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm44249-201ENSMUST00000204538 1805 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 AC162467.2-201ENSMUST00000219397 2571 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm42606-201ENSMUST00000114209 239 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm15578-201ENSMUST00000117320 475 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm12294-201ENSMUST00000119723 490 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm11259-201ENSMUST00000120554 715 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm14749-201ENSMUST00000121269 333 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm22793-201ENSMUST00000157227 330 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Mir1962-201ENSMUST00000157516 121 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm7162-201ENSMUST00000161205 1024 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm17129-201ENSMUST00000168168 505 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm5839-201ENSMUST00000182835 1007 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms