Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm15054-201ENSMUST00000117393 281 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm14251-201ENSMUST00000122133 279 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm14990-201ENSMUST00000122354 445 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm25178-201ENSMUST00000122633 325 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm4613-201ENSMUST00000165488 276 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm26238-201ENSMUST00000175538 117 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm38022-201ENSMUST00000191762 403 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm37629-201ENSMUST00000193635 1050 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm37017-201ENSMUST00000195266 747 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm43212-201ENSMUST00000198208 394 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm44286-201ENSMUST00000204098 1487 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm14000-201ENSMUST00000118670 233 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm12944-201ENSMUST00000119262 463 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm12400-201ENSMUST00000120915 1003 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm11263-201ENSMUST00000121853 749 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm26323-201ENSMUST00000157743 175 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Mir7084-201ENSMUST00000183876 70 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Mir6357-201ENSMUST00000184246 104 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm27617-201ENSMUST00000184321 168 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm8101-201ENSMUST00000192796 478 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm44590-201ENSMUST00000206161 391 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm6667-201ENSMUST00000217169 564 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm4796-201ENSMUST00000219802 624 ntBASIC8.67□□□□□ -1.02
Brf1Q8CFK2 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Brf1Q8CFK2 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm12601-201ENSMUST00000118994 846 ntBASIC8.66□□□□□ -1.02
Brf1Q8CFK2 Gm13463-201ENSMUST00000119020 233 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms