Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm43929-201ENSMUST00000203025 409 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm5723-201ENSMUST00000203096 432 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 AC132446.1-201ENSMUST00000222655 226 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 AV026068-218ENSMUST00000223980 575 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm11855-201ENSMUST00000121562 1869 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm11188-201ENSMUST00000122382 388 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm21181-201ENSMUST00000186249 330 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm26413-202ENSMUST00000198972 127 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gm2089-201ENSMUST00000218294 479 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.62□□□□□ -1.19
Ccdc40Q8BI79 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm12075-201ENSMUST00000117426 397 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm15422-201ENSMUST00000117453 541 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm12123-201ENSMUST00000120348 472 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm15928-201ENSMUST00000122455 280 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm4835-201ENSMUST00000155839 972 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm3611-201ENSMUST00000173687 877 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm28728-201ENSMUST00000189087 405 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm28164-201ENSMUST00000190143 442 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm19035-202ENSMUST00000194575 959 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm18469-201ENSMUST00000208850 439 ntBASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.61□□□□□ -1.19
Ccdc40Q8BI79 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms