Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.46□□□□□ -1.22
Scaf4Q6PFF0 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Mir675-201ENSMUST00000102320 84 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm12931-201ENSMUST00000117046 324 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm13229-201ENSMUST00000118238 340 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm12133-201ENSMUST00000121775 661 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm22143-201ENSMUST00000157401 203 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm22132-201ENSMUST00000175316 100 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Scgb2b30-201ENSMUST00000187013 336 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm28356-202ENSMUST00000187566 858 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Scgb2b10-201ENSMUST00000191403 318 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Mark4-ps-201ENSMUST00000196140 384 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm18839-201ENSMUST00000204292 670 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm44690-201ENSMUST00000207984 382 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm4536-201ENSMUST00000209157 542 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 AC167977.2-201ENSMUST00000225676 682 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm8623-201ENSMUST00000071573 436 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Scaf4Q6PFF0 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Mir705-201ENSMUST00000102058 82 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm24335-201ENSMUST00000104211 132 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm8662-201ENSMUST00000118644 574 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC7.44□□□□□ -1.22
Scaf4Q6PFF0 Gm3008-201ENSMUST00000160566 571 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms