Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm22470-201ENSMUST00000104117 130 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm11865-201ENSMUST00000118093 859 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm12331-201ENSMUST00000119927 622 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm11371-201ENSMUST00000120294 385 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm9697-201ENSMUST00000147052 997 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm36935-201ENSMUST00000192526 292 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm21054-201ENSMUST00000203981 380 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Gm22504-201ENSMUST00000082963 139 ntBASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp49Q6P9L4 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm15842-201ENSMUST00000120513 618 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm14251-201ENSMUST00000122133 279 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm4613-201ENSMUST00000165488 276 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.05□□□□□ -1.12
Usp49Q6P9L4 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp49Q6P9L4 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.04□□□□□ -1.12
Usp49Q6P9L4 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp49Q6P9L4 Gm12477-201ENSMUST00000121221 571 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms