Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 CT030662.1-201ENSMUST00000227380 232 ntBASIC7.22□□□□□ -1.25
SgcbP82349 AC154738.3-201ENSMUST00000227953 409 ntBASIC7.22□□□□□ -1.25
SgcbP82349 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.22□□□□□ -1.25
SgcbP82349 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.22□□□□□ -1.25
SgcbP82349 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SgcbP82349 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SgcbP82349 Gm5614-201ENSMUST00000091097 318 ntBASIC7.22□□□□□ -1.25
SgcbP82349 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SgcbP82349 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SgcbP82349 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
SgcbP82349 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC7.22□□□□□ -1.25
SgcbP82349 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SgcbP82349 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
SgcbP82349 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SgcbP82349 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SgcbP82349 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.25
SgcbP82349 AC154681.1-201ENSMUST00000225876 1735 ntBASIC7.21□□□□□ -1.25
SgcbP82349 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SgcbP82349 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
SgcbP82349 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
SgcbP82349 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
SgcbP82349 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SgcbP82349 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SgcbP82349 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SgcbP82349 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.21□□□□□ -1.25
SgcbP82349 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.21□□□□□ -1.26
SgcbP82349 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC7.21□□□□□ -1.26
SgcbP82349 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC7.21□□□□□ -1.26
SgcbP82349 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gm15176-201ENSMUST00000117734 135 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm14099-201ENSMUST00000117769 605 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm16383-201ENSMUST00000118122 232 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm15233-201ENSMUST00000118747 400 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gm11258-201ENSMUST00000121086 1218 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm11933-201ENSMUST00000121550 375 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm12864-201ENSMUST00000122207 1006 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm15928-201ENSMUST00000122455 280 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC7.21□□□□□ -1.26
SgcbP82349 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gm16588-201ENSMUST00000162889 355 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.21□□□□□ -1.26
SgcbP82349 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm26194-201ENSMUST00000175036 71 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm25145-201ENSMUST00000177640 110 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Mir6999-201ENSMUST00000183498 61 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC7.21□□□□□ -1.26
SgcbP82349 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.21□□□□□ -1.26
SgcbP82349 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC7.21□□□□□ -1.26
SgcbP82349 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.21□□□□□ -1.26
SgcbP82349 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC7.21□□□□□ -1.26
SgcbP82349 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
SgcbP82349 Gm19709-201ENSMUST00000215403 482 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.21□□□□□ -1.26
SgcbP82349 CT025603.4-201ENSMUST00000225777 413 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gm15433-201ENSMUST00000097671 891 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SgcbP82349 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SgcbP82349 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Gm5681-201ENSMUST00000189217 1533 ntBASIC7.21□□□□□ -1.26
SgcbP82349 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC7.21□□□□□ -1.26
SgcbP82349 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
SgcbP82349 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm40309-201ENSMUST00000202699 1752 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms