Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Nub1P54729 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm4910-201ENSMUST00000119605 366 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.41□□□□□ -1.06
Nub1P54729 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Mir6919-201ENSMUST00000185146 62 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm29513-201ENSMUST00000185741 202 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Gm28428-201ENSMUST00000188886 697 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm37376-201ENSMUST00000192176 453 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm30196-201ENSMUST00000208957 160 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm17911-201ENSMUST00000210806 877 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.41□□□□□ -1.06
Nub1P54729 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm19572-201ENSMUST00000214326 338 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.41□□□□□ -1.06
Nub1P54729 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 AC192616.1-201ENSMUST00000221922 132 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm18629-201ENSMUST00000222496 884 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.41□□□□□ -1.06
Nub1P54729 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.41□□□□□ -1.06
Nub1P54729 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.41□□□□□ -1.06
Nub1P54729 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm24143-201ENSMUST00000082633 145 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Gm22575-201ENSMUST00000082981 110 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nub1P54729 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.41□□□□□ -1.06
Nub1P54729 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Nub1P54729 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.41□□□□□ -1.06
Nub1P54729 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nub1P54729 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nub1P54729 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nub1P54729 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nub1P54729 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.4□□□□□ -1.06
Nub1P54729 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nub1P54729 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nub1P54729 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC8.4□□□□□ -1.06
Nub1P54729 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nub1P54729 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Nub1P54729 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nub1P54729 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nub1P54729 Gm37326-201ENSMUST00000192828 3071 ntBASIC8.4□□□□□ -1.06
Nub1P54729 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nub1P54729 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Nub1P54729 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.4□□□□□ -1.06
Nub1P54729 Gm14103-201ENSMUST00000119075 366 ntBASIC8.4□□□□□ -1.06
Nub1P54729 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.4□□□□□ -1.06
Nub1P54729 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC8.4□□□□□ -1.06
Nub1P54729 Gm12599-201ENSMUST00000120534 792 ntBASIC8.4□□□□□ -1.06
Nub1P54729 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.4□□□□□ -1.06
Nub1P54729 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC8.4□□□□□ -1.06
Nub1P54729 Gm1947-201ENSMUST00000122451 910 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms