Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.49□□□□□ -1.05
Traf1P39428 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.49□□□□□ -1.05
Traf1P39428 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.49□□□□□ -1.05
Traf1P39428 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.48□□□□□ -1.05
Traf1P39428 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Gm5752-201ENSMUST00000117771 594 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm11895-201ENSMUST00000122165 467 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.48□□□□□ -1.05
Traf1P39428 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC8.48□□□□□ -1.05
Traf1P39428 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.48□□□□□ -1.05
Traf1P39428 Gm27001-201ENSMUST00000182252 936 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm29354-201ENSMUST00000187613 696 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm44112-201ENSMUST00000204787 372 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm18562-201ENSMUST00000209949 915 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Traf1P39428 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Gm2398-201ENSMUST00000218347 883 ntBASIC8.48□□□□□ -1.05
Traf1P39428 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.48□□□□□ -1.05
Traf1P39428 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.48□□□□□ -1.05
Traf1P39428 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
Traf1P39428 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Traf1P39428 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.48□□□□□ -1.05
Traf1P39428 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Traf1P39428 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Traf1P39428 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.47□□□□□ -1.05
Traf1P39428 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.47□□□□□ -1.05
Traf1P39428 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.47□□□□□ -1.05
Traf1P39428 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Traf1P39428 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Traf1P39428 Gm14904-201ENSMUST00000117067 335 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm14891-201ENSMUST00000117378 596 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm13739-201ENSMUST00000118020 530 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm13486-201ENSMUST00000119910 282 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm7599-201ENSMUST00000121453 796 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Gm21182-201ENSMUST00000178899 794 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm27218-201ENSMUST00000183745 392 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm27684-201ENSMUST00000183778 80 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm5147-201ENSMUST00000185999 794 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm28580-201ENSMUST00000186767 88 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm7891-201ENSMUST00000190284 843 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms