Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm25757-201ENSMUST00000103986 123 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm26016-201ENSMUST00000104403 129 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm8662-201ENSMUST00000118644 574 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm15153-201ENSMUST00000119867 274 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm15362-201ENSMUST00000121459 388 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm13221-201ENSMUST00000121712 430 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC7.18□□□□□ -1.26
Hoxc11P31313 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm22702-201ENSMUST00000175372 69 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm27866-201ENSMUST00000184459 171 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm44147-201ENSMUST00000204658 94 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm20136-201ENSMUST00000207501 891 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm45446-201ENSMUST00000209348 216 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm19154-201ENSMUST00000223330 940 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 CT025523.1-201ENSMUST00000228318 694 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.18□□□□□ -1.26
Hoxc11P31313 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Hoxc11P31313 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm15842-201ENSMUST00000120513 618 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm11188-201ENSMUST00000122382 388 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm26357-201ENSMUST00000158218 115 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.17□□□□□ -1.26
Hoxc11P31313 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm29214-201ENSMUST00000190216 570 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm44356-201ENSMUST00000196731 111 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm44931-201ENSMUST00000206056 545 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Hoxc11P31313 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm5791-201ENSMUST00000220840 489 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Mir455-201ENSMUST00000093594 82 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.17□□□□□ -1.26
Hoxc11P31313 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Hoxc11P31313 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Hoxc11P31313 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Hoxc11P31313 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Hoxc11P31313 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Hoxc11P31313 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.16□□□□□ -1.26
Hoxc11P31313 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.16□□□□□ -1.26
Hoxc11P31313 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Hoxc11P31313 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms