Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gm38118-201ENSMUST00000192052 2222 ntBASIC7.16□□□□□ -1.26
Lire1P11260 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Lire1P11260 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Lire1P11260 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm24373-201ENSMUST00000104393 132 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm25725-201ENSMUST00000104528 130 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm17184-201ENSMUST00000111864 462 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm5530-201ENSMUST00000117185 985 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm13983-201ENSMUST00000118018 865 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm11997-201ENSMUST00000118697 313 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm15572-201ENSMUST00000119248 593 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm14528-201ENSMUST00000120615 231 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC7.15□□□□□ -1.26
Lire1P11260 n-R5s201-201ENSMUST00000122622 116 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 Gm15843-201ENSMUST00000146593 529 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm26182-201ENSMUST00000157688 116 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC7.15□□□□□ -1.26
Lire1P11260 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm5314-201ENSMUST00000204852 466 ntBASIC7.15□□□□□ -1.26
Lire1P11260 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Lire1P11260 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.15□□□□□ -1.26
Lire1P11260 AC114585.2-203ENSMUST00000228400 339 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Lire1P11260 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Lire1P11260 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Gm16391-201ENSMUST00000086601 447 ntBASIC7.15□□□□□ -1.26
Lire1P11260 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Lire1P11260 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.15□□□□□ -1.27
Lire1P11260 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Lire1P11260 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Lire1P11260 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Lire1P11260 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Lire1P11260 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Lire1P11260 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Lire1P11260 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.15□□□□□ -1.27
Lire1P11260 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Lire1P11260 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.15□□□□□ -1.27
Lire1P11260 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.15□□□□□ -1.27
Lire1P11260 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Lire1P11260 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Lire1P11260 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm24257-201ENSMUST00000104472 131 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Fau-ps2-201ENSMUST00000119333 371 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm14450-201ENSMUST00000119984 240 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm11370-201ENSMUST00000120583 260 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm12804-201ENSMUST00000121030 999 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm5931-201ENSMUST00000121308 477 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Gm22361-201ENSMUST00000158435 176 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm17129-201ENSMUST00000168168 505 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Lire1P11260 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm38051-201ENSMUST00000193740 433 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm37585-201ENSMUST00000195440 280 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm18131-201ENSMUST00000199241 449 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms