Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.86□□□□□ -1.15
Chmp6P0C0A3 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm13414-201ENSMUST00000117516 727 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm12331-201ENSMUST00000119927 622 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm18191-201ENSMUST00000174624 824 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm19035-202ENSMUST00000194575 959 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm18428-201ENSMUST00000194986 791 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Chmp6P0C0A3 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm15644-201ENSMUST00000121764 387 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm22342-201ENSMUST00000122647 298 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm27218-201ENSMUST00000183745 392 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm20690-202ENSMUST00000195126 355 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm26413-201ENSMUST00000196783 126 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm44192-201ENSMUST00000204195 556 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm18690-201ENSMUST00000204488 985 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm45198-201ENSMUST00000206796 591 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm45478-201ENSMUST00000209472 211 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm2089-201ENSMUST00000218294 479 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms