Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CopeO89079 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.32□□□□□ -1.24
CopeO89079 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CopeO89079 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CopeO89079 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC7.32□□□□□ -1.24
CopeO89079 Gm11810-201ENSMUST00000118311 333 ntBASIC7.32□□□□□ -1.24
CopeO89079 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm13940-201ENSMUST00000121023 301 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm12181-201ENSMUST00000121448 531 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.32□□□□□ -1.24
CopeO89079 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.32□□□□□ -1.24
CopeO89079 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
CopeO89079 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
CopeO89079 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.32□□□□□ -1.24
CopeO89079 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.32□□□□□ -1.24
CopeO89079 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.32□□□□□ -1.24
CopeO89079 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.32□□□□□ -1.24
CopeO89079 Gm8304-201ENSMUST00000185744 584 ntBASIC7.32□□□□□ -1.24
CopeO89079 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Gm9710-201ENSMUST00000198053 499 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC7.32□□□□□ -1.24
CopeO89079 Gm8168-201ENSMUST00000209631 948 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.32□□□□□ -1.24
CopeO89079 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.32□□□□□ -1.24
CopeO89079 Gm5791-201ENSMUST00000220840 489 ntBASIC7.32□□□□□ -1.24
CopeO89079 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC7.32□□□□□ -1.24
CopeO89079 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
CopeO89079 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CopeO89079 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CopeO89079 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CopeO89079 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.31□□□□□ -1.24
CopeO89079 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CopeO89079 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm22671-201ENSMUST00000104420 134 ntBASIC7.31□□□□□ -1.24
CopeO89079 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm14796-201ENSMUST00000121216 959 ntBASIC7.31□□□□□ -1.24
CopeO89079 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm4835-201ENSMUST00000155839 972 ntBASIC7.31□□□□□ -1.24
CopeO89079 Gm22882-201ENSMUST00000157749 124 ntBASIC7.31□□□□□ -1.24
CopeO89079 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm23945-201ENSMUST00000179609 92 ntBASIC7.31□□□□□ -1.24
CopeO89079 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.31□□□□□ -1.24
CopeO89079 Gm7678-201ENSMUST00000181879 943 ntBASIC7.31□□□□□ -1.24
CopeO89079 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm28239-201ENSMUST00000190225 447 ntBASIC7.31□□□□□ -1.24
CopeO89079 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Gm18292-201ENSMUST00000216673 919 ntBASIC7.31□□□□□ -1.24
CopeO89079 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.31□□□□□ -1.24
CopeO89079 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CopeO89079 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
CopeO89079 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.31□□□□□ -1.24
CopeO89079 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.31□□□□□ -1.24
CopeO89079 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 AC132384.7-201ENSMUST00000220198 1391 ntBASIC7.31□□□□□ -1.24
CopeO89079 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CopeO89079 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CopeO89079 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.31□□□□□ -1.24
CopeO89079 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.3□□□□□ -1.24
CopeO89079 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CopeO89079 Gm38195-201ENSMUST00000194247 1499 ntBASIC7.3□□□□□ -1.24
CopeO89079 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
CopeO89079 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CopeO89079 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
CopeO89079 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CopeO89079 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CopeO89079 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CopeO89079 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.3□□□□□ -1.24
CopeO89079 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.3□□□□□ -1.24
CopeO89079 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
CopeO89079 Gm15644-201ENSMUST00000121764 387 ntBASIC7.3□□□□□ -1.24
CopeO89079 Gm15730-201ENSMUST00000121828 415 ntBASIC7.3□□□□□ -1.24
CopeO89079 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.3□□□□□ -1.24
CopeO89079 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.3□□□□□ -1.24
CopeO89079 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms