Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3550W4VSN7 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm22661-201ENSMUST00000104192 132 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm11810-201ENSMUST00000118311 333 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm12710-201ENSMUST00000119011 216 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm14016-201ENSMUST00000119095 486 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm11928-201ENSMUST00000119323 437 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm15843-201ENSMUST00000146593 529 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm26407-201ENSMUST00000158504 307 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm43013-201ENSMUST00000198216 247 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm18562-201ENSMUST00000209949 915 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm45756-201ENSMUST00000212491 407 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm7392-201ENSMUST00000217815 345 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3550W4VSN7 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Gm3550W4VSN7 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms