Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm28211-201ENSMUST00000190920 315 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Trbv9-201ENSMUST00000194494 290 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm42908-201ENSMUST00000197508 870 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm43004-201ENSMUST00000201872 703 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm42646-201ENSMUST00000202233 914 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm44790-201ENSMUST00000204137 798 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm38941-201ENSMUST00000208606 529 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm45549-201ENSMUST00000210180 975 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 AC162467.1-201ENSMUST00000220254 621 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm32300-201ENSMUST00000221735 515 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Olfr770-201ENSMUST00000062314 936 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm6457-201ENSMUST00000066378 815 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Trim42Q9D2H5 Gm14849-201ENSMUST00000122293 2846 ntBASIC8.02□□□□□ -1.12
Trim42Q9D2H5 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim42Q9D2H5 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Trim42Q9D2H5 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Trim42Q9D2H5 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm8605-201ENSMUST00000221619 1370 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Ms4a3-201ENSMUST00000112984 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm15720-201ENSMUST00000117133 282 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm15516-201ENSMUST00000117292 193 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm11461-201ENSMUST00000119909 387 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm15192-201ENSMUST00000121005 293 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm23899-201ENSMUST00000158112 90 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm24393-201ENSMUST00000158135 97 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm22207-201ENSMUST00000158609 317 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm16300-201ENSMUST00000160031 1279 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Ear-ps10-201ENSMUST00000161871 460 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm17377-201ENSMUST00000165184 207 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm8964-201ENSMUST00000165944 805 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm5851-201ENSMUST00000194132 1204 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm7492-201ENSMUST00000201745 725 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm44253-201ENSMUST00000203387 628 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm6261-201ENSMUST00000204707 760 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 9530020I12Rik-202ENSMUST00000218368 1235 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 AC138667.1-201ENSMUST00000225472 316 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 AC122393.1-201ENSMUST00000226570 319 ntBASIC8.02□□□□□ -1.13
Trim42Q9D2H5 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim42Q9D2H5 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms