Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm24472-201ENSMUST00000104484 132 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm15154-201ENSMUST00000117590 366 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm11207-201ENSMUST00000117824 414 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm14036-201ENSMUST00000118248 480 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm12401-201ENSMUST00000118435 228 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm15062-201ENSMUST00000120567 367 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Mir1968-201ENSMUST00000157429 68 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm17051-201ENSMUST00000170787 487 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Mir6999-201ENSMUST00000183498 61 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm5251-201ENSMUST00000188959 472 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm37371-201ENSMUST00000194837 392 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm10297-201ENSMUST00000207136 651 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm18060-201ENSMUST00000207407 564 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 AC153968.2-201ENSMUST00000215579 1140 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 AC153522.1-201ENSMUST00000220047 1090 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 CT030194.1-201ENSMUST00000225507 532 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Olfr1255-201ENSMUST00000057369 933 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.33□□□□□ -1.24
Trim8Q99PJ2 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim8Q99PJ2 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm13573-201ENSMUST00000116410 631 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm13229-201ENSMUST00000118238 340 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm13325-201ENSMUST00000118746 806 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm9440-201ENSMUST00000119667 539 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm13059-201ENSMUST00000119881 398 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms