Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm28953-201ENSMUST00000188336 697 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm20788-201ENSMUST00000190538 697 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm37295-201ENSMUST00000192186 109 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm6123-201ENSMUST00000193658 1069 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm35108-201ENSMUST00000194321 699 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm37395-201ENSMUST00000194721 697 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm33191-201ENSMUST00000195604 699 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm18562-201ENSMUST00000209949 915 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm4780-201ENSMUST00000213206 1242 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cstf3Q99LI7 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm15481-201ENSMUST00000120264 539 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm14048-201ENSMUST00000121864 1268 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm25770-201ENSMUST00000158566 115 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm27218-201ENSMUST00000183745 392 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm28546-201ENSMUST00000188221 615 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm29195-201ENSMUST00000189038 379 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm43212-201ENSMUST00000198208 394 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm43013-201ENSMUST00000198216 247 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm26413-202ENSMUST00000198972 127 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm18131-201ENSMUST00000199241 449 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm5250-201ENSMUST00000059065 321 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cstf3Q99LI7 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms