Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm12258-201ENSMUST00000093768 2524 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm24373-201ENSMUST00000104393 132 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Mir669e-201ENSMUST00000117003 119 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm15403-201ENSMUST00000119343 1227 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm11954-201ENSMUST00000121403 349 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm16129-201ENSMUST00000152628 486 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm9141-201ENSMUST00000159355 1007 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Mir3060-201ENSMUST00000175339 83 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm25692-201ENSMUST00000175444 125 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm7436-201ENSMUST00000187229 391 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm20776-201ENSMUST00000189940 700 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm4545-201ENSMUST00000190797 603 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm28766-201ENSMUST00000191086 234 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC123835.1-201ENSMUST00000214362 670 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC158531.2-201ENSMUST00000224264 473 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.07□□□□□ -1.28
Clrn1Q8K445 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clrn1Q8K445 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 BC085271-201ENSMUST00000191852 1487 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm42546-201ENSMUST00000201584 2592 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm14016-201ENSMUST00000119095 486 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm11446-201ENSMUST00000121319 866 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm22600-201ENSMUST00000157598 269 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm22687-201ENSMUST00000158301 105 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.06□□□□□ -1.28
Clrn1Q8K445 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Gm20574-201ENSMUST00000182867 917 ntBASIC7.06□□□□□ -1.28
Clrn1Q8K445 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms