Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cchcr1Q8K2I2 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm5759-201ENSMUST00000119203 811 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm11688-201ENSMUST00000122145 308 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm2709-201ENSMUST00000142979 350 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm24883-201ENSMUST00000158391 281 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm7891-201ENSMUST00000190284 843 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm28341-201ENSMUST00000190883 472 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm37678-201ENSMUST00000192908 1146 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm8921-201ENSMUST00000204306 649 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm9240-201ENSMUST00000206527 742 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm7493-201ENSMUST00000085919 626 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Gm37940-201ENSMUST00000194243 3251 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cchcr1Q8K2I2 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm23484-201ENSMUST00000104178 131 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm23529-201ENSMUST00000104562 132 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm14016-201ENSMUST00000119095 486 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm23657-201ENSMUST00000122623 294 ntBASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Cchcr1Q8K2I2 Gm17097-201ENSMUST00000166414 714 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms