Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm15739-201ENSMUST00000118049 872 ntBASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Pea15b-201ENSMUST00000182806 387 ntBASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm37669-201ENSMUST00000192184 820 ntBASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Gm8275-201ENSMUST00000219732 424 ntBASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Atg4aQ8C9S8 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Mir688-201ENSMUST00000102055 75 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm22707-201ENSMUST00000103834 110 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm4373-201ENSMUST00000178571 556 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm4308-201ENSMUST00000179735 914 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Mir378d-201ENSMUST00000184232 110 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm28070-201ENSMUST00000191502 445 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm26413-201ENSMUST00000196783 126 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm8539-201ENSMUST00000199822 501 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Snora21-201ENSMUST00000082967 137 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Atg4aQ8C9S8 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm25757-201ENSMUST00000103986 123 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm10157-201ENSMUST00000139408 343 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms