Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm44279-201ENSMUST00000205154 472 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm2975-201ENSMUST00000209710 820 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm24036-201ENSMUST00000082868 156 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm16020-201ENSMUST00000084281 210 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 CT030185.2-201ENSMUST00000222614 1310 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm8924-201ENSMUST00000197405 1132 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm21040-201ENSMUST00000199493 1132 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 AC155709.1-201ENSMUST00000218794 162 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 AC129597.1-201ENSMUST00000223046 1234 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 AC156574.1-201ENSMUST00000227084 452 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm22748-201ENSMUST00000082493 136 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm24924-201ENSMUST00000084007 164 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.95□□□□□ -0.82
Usp40Q8BWR4 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm26575-201ENSMUST00000181714 2232 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm28906-201ENSMUST00000191371 1779 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 AC164433.1-201ENSMUST00000226138 1544 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm5133-201ENSMUST00000118940 1255 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm28801-201ENSMUST00000188761 449 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm38177-201ENSMUST00000192213 1040 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm37073-201ENSMUST00000192469 1222 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm6649-201ENSMUST00000199743 1165 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm44227-201ENSMUST00000203576 241 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm5841-201ENSMUST00000195307 2177 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Mbnl2-203ENSMUST00000226800 3328 ntBASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.94□□□□□ -0.82
Usp40Q8BWR4 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms