Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm13137-201ENSMUST00000118035 345 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm15665-201ENSMUST00000119116 847 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm22795-201ENSMUST00000157233 118 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm25164-201ENSMUST00000158908 116 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm23945-201ENSMUST00000179609 92 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm18709-201ENSMUST00000180564 489 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm7763-201ENSMUST00000182220 1006 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm27218-201ENSMUST00000183745 392 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
Trim43aQ3TL54 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm12632-201ENSMUST00000121223 495 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm23079-201ENSMUST00000157847 117 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Mir6972-201ENSMUST00000184774 64 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm37977-201ENSMUST00000193096 721 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm38337-201ENSMUST00000193986 599 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm44192-201ENSMUST00000204195 556 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim43aQ3TL54 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm23484-201ENSMUST00000104178 131 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm23485-201ENSMUST00000104181 155 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm14584-201ENSMUST00000118956 637 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm25277-201ENSMUST00000157266 324 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms