Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm18562-201ENSMUST00000209949 915 ntBASIC9.27□□□□□ -0.93
Smarcc1P97496 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC9.27□□□□□ -0.93
Smarcc1P97496 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC9.27□□□□□ -0.93
Smarcc1P97496 AC124184.1-201ENSMUST00000218167 283 ntBASIC9.27□□□□□ -0.93
Smarcc1P97496 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smarcc1P97496 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smarcc1P97496 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smarcc1P97496 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smarcc1P97496 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smarcc1P97496 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smarcc1P97496 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.27□□□□□ -0.93
Smarcc1P97496 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Smarcc1P97496 CT030185.2-201ENSMUST00000222614 1310 ntBASIC9.27□□□□□ -0.93
Smarcc1P97496 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smarcc1P97496 Gm5361-201ENSMUST00000211041 1498 ntBASIC9.27□□□□□ -0.93
Smarcc1P97496 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smarcc1P97496 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smarcc1P97496 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm11889-201ENSMUST00000118402 1079 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm15061-201ENSMUST00000121076 1046 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm14787-201ENSMUST00000121236 388 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm7494-201ENSMUST00000121248 441 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm11609-201ENSMUST00000121926 793 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm11895-201ENSMUST00000122165 467 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm24011-201ENSMUST00000157732 268 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm4202-201ENSMUST00000169025 733 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm28416-201ENSMUST00000188334 292 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm8480-201ENSMUST00000190350 698 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm2860-201ENSMUST00000199226 707 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 AC099934.1-201ENSMUST00000200493 79 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC9.26□□□□□ -0.93
Smarcc1P97496 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 CT010453.2-201ENSMUST00000227005 483 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm22748-201ENSMUST00000082493 136 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm6327-201ENSMUST00000171185 1335 ntBASIC9.26□□□□□ -0.93
Smarcc1P97496 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smarcc1P97496 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smarcc1P97496 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm6654-201ENSMUST00000118950 348 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm12813-201ENSMUST00000119615 902 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm12175-201ENSMUST00000122081 345 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm22795-201ENSMUST00000157233 118 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm18808-201ENSMUST00000173316 462 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm24824-201ENSMUST00000175097 78 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm8357-201ENSMUST00000181115 1011 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm29354-201ENSMUST00000187613 696 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm20128-201ENSMUST00000196189 417 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC9.25□□□□□ -0.93
Smarcc1P97496 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms