Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Gm2089-201ENSMUST00000218294 479 ntBASIC8.51□□□□□ -1.05
Traf1P39428 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.51□□□□□ -1.05
Traf1P39428 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.51□□□□□ -1.05
Traf1P39428 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Traf1P39428 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Traf1P39428 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Traf1P39428 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Traf1P39428 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Traf1P39428 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm17170-201ENSMUST00000112785 316 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm15644-201ENSMUST00000121764 387 ntBASIC8.5□□□□□ -1.05
Traf1P39428 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.5□□□□□ -1.05
Traf1P39428 Gm29214-201ENSMUST00000190216 570 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm43147-201ENSMUST00000196944 542 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm8539-201ENSMUST00000199822 501 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.5□□□□□ -1.05
Traf1P39428 Gm8667-201ENSMUST00000211112 449 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm6581-201ENSMUST00000214545 260 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Traf1P39428 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Traf1P39428 Gm6887-201ENSMUST00000080945 482 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.5□□□□□ -1.05
Traf1P39428 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8.5□□□□□ -1.05
Traf1P39428 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.5□□□□□ -1.05
Traf1P39428 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Traf1P39428 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.49□□□□□ -1.05
Traf1P39428 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Traf1P39428 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Gm15422-201ENSMUST00000117453 541 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm15105-201ENSMUST00000117777 204 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm12321-201ENSMUST00000121485 804 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC8.49□□□□□ -1.05
Traf1P39428 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Gm23077-201ENSMUST00000157854 116 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm2976-201ENSMUST00000160362 513 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm8715-201ENSMUST00000162728 531 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm28983-201ENSMUST00000186685 614 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm28150-201ENSMUST00000187305 614 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm28377-201ENSMUST00000189695 720 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.49□□□□□ -1.05
Traf1P39428 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Gm5305-201ENSMUST00000204010 746 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm7419-201ENSMUST00000209962 925 ntBASIC8.49□□□□□ -1.05
Traf1P39428 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.49□□□□□ -1.05
Traf1P39428 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.49□□□□□ -1.05
Traf1P39428 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Traf1P39428 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Traf1P39428 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 352.4 ms